CASIMIR Systems Biology & Capture Workshop and General Meeting
9-10th December 2009, Cambridge9th December 2009
CAPTURING BIOLOGICAL DATA FOR SYSTEMS BIOLOGY, WORKSHOP
Addressing the capture of non-standard data types - going beyond sequences, transcriptomic data and interactions, that might be useful in systems modelling.
Session 1
09:15 - 09:30 Introduction
Paul Schofield, CASIMIR Coordinator, Cambridge University UK (Chair)
09:30 – 10:00 Next generation data challenges for systems phenotyping
John Hancock
10:00 – 10:30 Data challenges in systems modelling
Marcus Tindall, University of Reading UK
11:00 – 11:30 Systems biology in practice
Lee Hazelwood
11:30-12:00 Data standards and requirements for systems modelling
Bernard de Bono
12:00 – 12:30 Challenges in the collection and utilization of high-throughput data; experience of Array Express
Helen Parkinson
14:00 – 14:30 Minimal standards for description of experiments
Chris Taylor
14:30 – 15:00 MIRIAM Resources: a semantic platform for Systems Biology
Camille Laibe
15:00 – 15:30 Semantic web based phenotype data integration in RIKEN
Hiroshi Masuya
16:15 – 16:45 Data Capture into EuroPhenome, current procedures and future thoughts
Hugh Morgan
10th December 2009
GENERAL MANAGEMENT MEETING
09.15 - 09.30 Paul Schofield, CASIMIR Coordinator, Cambridge University UK (Chair)
09:30 – 09:50 WP4 Report
John Hancock
09:50 – 10:10 WP5 Report
Damian Smedley
10:10 – 10:30 WP6 Report
Paul Schofield on behalf of Nadia Rosenthal
11:00 – 11:20 WP7 Report
Christina Chandras
11:20 – 11:40 WP8 Report
Klaus Schughart
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